Medical Imaging

A sample of synthetic noise-free reference image created by combining multiple instances of structurally preserved cilia cross-sections. The author has removed the dataset, the interested users can contact the author via email: amitsuveer@gmail.com 

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This dataset is for the paper titled: Segmentation of Cervical Cell Images based on Generative Adversarial Networks. The dataset is used to train and test the Cell-GAN, a generative adversarial network. After training, the Cell-GAN is able to generate a complete single-cell image which has the similar contour to the cell to be segmented.

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1414 Views

For the development and evaluation of organ localization methods, we build a set of annotations of organ bounding boxes based on the MICCAI Liver Tumor Segmentation (LiTS) challenge dataset. Bounding boxes of 11 body organs are included:  heart (53/28), left lung (52/21), right lung (52/21), liver (131/70), spleen (131/70), pancreas (131/70), left kidney (129/70), right kidney (131/69), bladder (109/67), left femoral head (109/66) and right femoral head (105/66). The number in the parentheses indicates the number of the organs annotated in training and testing sets.

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3928 Views

We make our dataset publicly avaiable. It consists of 50 H&E stained histopathology annotated images at the nuclei level. This dataset is ideal for those who want an exhaustive annotation of H&E breast cancer patient from a Tripple Negative Breast Cancer cohort.

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2650 Views

Access the dataset for images of typical diabetic retinopathy lesions and also normal retinal structures annotated at a pixel level, focused on an Indian population. This dataset provides information on the disease severity of diabetic retinopathy, and diabetic macular edema for each image.

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107577 Views

Interventional applications of photoacoustic imaging typically require visualization of point-like targets, such as the small, circular, cross-sectional tips of needles, catheters, or brachytherapy seeds. When these point-like targets are imaged in the presence of highly echogenic structures, the resulting photoacoustic wave creates a reflection artifact that may appear as a true signal. We propose to use deep learning techniques to identify these type of noise artifacts for removal in experimental photoacoustic data.

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3004 Views

These datasets were used to produce the results of the following TMI paper: "3D Quantification of Filopodia in Motile Cancer Cells", Castilla C., et al. (2019). IEEE Transactions on Medical Imaging 38(3):862,872.

 

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653 Views

The investigation of the performance of different Positron Emission Tomography (PET) reconstruction and motion compensation methods requires an accurate and realistic representation of the anatomy and motion trajectories as observed in real subjects during acquisitions. The generation of well- controlled clinical datasets is difficult due to the many different clinical protocols, scanner specifications, patient sizes and physiological variations. Alternatively, computational phantoms can be used to generate large datasets for different disease states, providing a ground truth.

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210 Views

A database of lips traces
Cheiloscopy is a forensic investigation technique that deals with identification of humans based on lips traces. Lip prints are unique and permanent for each individual, and next to the fingerprinting, dental identification, and DNA analysis can be one of the basis for criminal/forensics analysis.

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1866 Views

The class of registration methods proposed in the framework of Stokes Large Deformation
Diffeomorphic Metric Mapping is a particularly interesting family of physically
meaningful diffeomorphic registration methods.
Stokes-LDDMM methods are formulated as a conditioned variational problem,
where the different physical models are imposed using the associated partial differential equations
as hard constraints.
The most significant limitation of Stokes-LDDMM framework is its huge computational complexity.

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107 Views

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