Medical Imaging

Endoscopy is a widely used clinical procedure for the early detection of cancers in hollow-organs such as oesophagus, stomach, and colon. Computer-assisted methods for accurate and temporally consistent localisation and segmentation of diseased region-of-interests enable precise quantification and mapping of lesions from clinical endoscopy videos which is critical for monitoring and surgical planning. Innovations have the potential to improve current medical practices and refine healthcare systems worldwide.

Last Updated On: 
Sat, 02/27/2021 - 05:11

Nextmed project is a software platform for the segmentation and visualization of medical images. It consist on a series of different automatic segmentation algorithms for different anatomical structures and  a platform for the visualization of the results as 3D models.

This dataset contains the .obj and .nrrd files that correspond to the results of applying our automatic lung segmentation algorithm to the LIDC-IDRI dataset.

This dataset relates to 718 of the 1012 LIDC-IDRI scans.

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The migration of cancer cells is highly regulated by the biomechanical properties of their local microenvironment. Using 3D scaffolds of simple composition, several aspects of cancer cell mechanosensing (signal transduction, EMC remodeling, traction forces) have been separately analyzed in the context of cell migration. However, a combined study of these factors in 3D scaffolds that more closely resemble the complex microenvironment of the cancer ECM is still missing.

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OCTA-500

Optical coherence tomography angiography (OCTA) is a retinal imaging modality that allows a micron-level resolution to present the three-dimensional structure of the retinal vascular.

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CHALLENGE ON ULTRASOUND BEAMFORMING WITH DEEP LEARNING (CUBDL)

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Some examples of the non-public data set ImageCLEF 2019 VQA-Med, including training, validation and test part.

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This dataset was used to investigate numerical methods of integration of the Frenet-Serret equations as applied to the study of vessel shape.  This data is a compliation of previously published data from the following papers:

A. V. Kamenskiy, J. N. MacTaggart, I. I. Pipinos, et al., “Three-dimensional geometry of the human carotid artery,” Journal of Biomechanical Engineering, vol. 134, no. 6, p. 064592, 2012.

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Features Extracted from BraTS 2012-2013

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An accurate analysis of fluid–structure interaction (FSI) at compliant arteries via ultrasound (US) imaging and numerical modeling is a limitation of several studies. In this study, we propose a deep learning-based boundary detection and compensation (DL-BDC) technique that can segment vessel boundaries by harnessing the convolutional neural network and wall motion compensation in near-wall flow dynamics. The segmentation performance of the technique is evaluated through numerical simulations with synthetic US images and in vitro experiments.

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