The dataset used in the paper "A Deep Learning Approach for Segmentation, Classification and Visualization of 3D High Frequency Ultrasound Images of Mouse Embryos" is provided here. It contains both the segmentation and classification images with manual labels. 

Instructions: 

The dataset contains the ultrasound mouse embyro images with manual labels. For more detail, please look into each subfolder and the paper "A Deep Learning Approach for Segmentation, Classification and Visualization of 3D High Frequency Ultrasound Images of Mouse Embryos". Or you can contact the author by zq415@nyu.edu if you have any question about the dataset and the paper. Thanks!

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The 3DLSC-COVID datset  includes a total of  1,805 3D chest CT scans with more than 570,000 CT slices were collected from 2 standard CT scanners of Liyuan Hospital, i.e.,  UIH uCT 510 and GE Optima CT600.  Among all CT scans, there were 794 positive cases of COVID-19, which were further confirmed by clinical symptoms and RT-PCR from January 16 to April 16, 2020.

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We chose 8 publicly available CT volumes of COVID-19 positive patients which were available from https://doi.org/10.5281/zenodo.3757476 and used 3D slicer to generate volumetric annotations of 512*512 dimension for 5 lung lobes namely right upper lobe, right middle lobe, right lower lobe, left upper lobe and left lower lobe. These annotations are validated by a radiologist with over 15 years of experience. 

Instructions: 

CT volumes can be downloaded from https://doi.org/10.5281/zenodo.3757476

Volumetric annotations for 5 lobe segments namely right upper lobe, right middle lobe, right lower lobe, left upper lobe and left lower lobe are saved as segments 1 to 5 respectively. 

For scans with prefix coronacases_00x their corresponding annotations are uploaded with suffix lobes

The scans and annotations measure 512*512 and are in .nii format

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This is the last in a series of challenges and competitons sponsored by IEEE Brain Initiative in 2017 that explore various brain/neuro datasets.  Results and final presentations are expected to be made at the Boston (Cambridge) event, December 9, 2017.  NOTE: EVENT IS STILL ON AS SCHEDULED DESPITE WEATHER. 

COMPETITION DETAILS: https://brain.ieee.org/news/call-participation-ieee-brain-data-bank-chal...

Last Updated On: 
Tue, 05/29/2018 - 14:22
Citation Author(s): 
Barbey, AK; Kramer, A; Cohen, N; Hillman, C