Prediction of the relative binding affinity for the peptide sequences against 14-3-3s

Citation Author(s):
Chao
Wang
Submitted by:
Chao Wang
Last updated:
Fri, 07/24/2020 - 00:51
DOI:
10.21227/shj2-2f62
Data Format:
*.xlsx;
License:
Creative Commons Attribution
188 Views
Categories:
Biomedical and Health Sciences
Keywords:
bioinformatics, Modeling, Learning in predictions
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Abstract 

The relative binding affiniy values of all 8000 tripeptide sequenses are shown here. The values are standardized by isoforms so that the mean is zero and the variance is one. The sequences are ordered by the results of hierarchical cluster analysis. 

Instructions: 

The group of tripeptides in N-terminal sublibrary that found by cluster analysis in the study is highlighted by black borders. And the sequences that reported to bind to 14-3-3s previously are marked by red color. The marked sequences are:RST(c-Raf-1, A-Raf), RDS(Cdc25a), RPS(Cdc25b), RAA(PKC-ε), RAK(PCTAIRE-2), RSH(mT), RHA(Tyr hydroxylase), RHS(Tryp hydroxylase), RSK(A20), RIH(Cdc25a), RFQ(Cdc25b), CVR(PKCγ), PTR(IRS-1), SYT(K8 keratin), LYR(Clathrin assembly prot).

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