Oriented Cell Dataset (OCD)

Citation Author(s):: Angelo Angonezi (Universidade Federal do Rio Grande do Sul)

Fernanda Oliveira (Universidade Federal do Rio Grande do Sul)

Juliano Faccioni (Universidade Federal do Rio Grande do Sul)

Camila Cassel (Universidade Federal do Rio Grande do Sul)

Débora Santos de Sousa (Universidade Federal do Rio Grande do Sul)

Samlai Vedovatto (Universidade Federal do Rio Grande do Sul)

Guido Lenz (Universidade Federal do Rio Grande do Sul)

Cláudio Jung (Universidade Federal do Rio Grande do Sul)

Lucas Kirsten (Universidade Federal do Rio Grande do Sul)
Submitted by:: Lucas Kirsten
Last updated:: Sat, 05/18/2024 - 20:45
DOI:: 10.21227/3rk2-b882

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Categories:

Keywords:

cell detection; oriented bounding boxes; object detection; microscopic image; bright-field microscope

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Abstract

OCD description. Cell lines A172 and U251: human glioblastoma; MCF7: human breast cancer; MRC5: human lung fibroblast; SCC25: human squamous cell carcinoma. Cultivation condition CTR: cells belonging to the control group - without the addition of chemotherapy; TMZ: cells treated with 50 μM temozolomide in some cultivation step.

Split

Train
- Microscope: CytoSMART
- Magnification: 10x/20x
- Cell line: A172
  - Cultivation Condition: CTR
  - Number of Images: 52
  - Images Resolution: 1280px × 720px
- Cell line: U251
  - Cultivation Condition: CTR
  - Number of Images: 4
- Microscope: Zeiss Axiovert 200
- Magnification: 10x
- Cell line: MCF7
  - Cultivation Condition: CTR
  - Number of Images: 19
  - Images Resolution: 1388px × 1040px
- Cell line: MRC5
  - Cultivation Condition: CTR
  - Number of Images: 20
Test
- Microscope: CytoSMART
- Magnification: 10x/20x
- Cell line: A172
  - Cultivation Condition: CTR
  - Number of Images: 4
  - Images Resolution: 1280px × 720px
- Cell line: U251
  - Cultivation Condition: CTR
  - Number of Images: 1
- Microscope: Zeiss Axiovert 200
- Magnification: 10x
- Cell line: MCF7
  - Cultivation Condition: CTR
  - Number of Images: 10
  - Images Resolution: 1388px × 1040px
- Cell line: MRC5
  - Cultivation Condition: CTR
  - Number of Images: 10
Annotators' Comparison
- Microscope: CytoSMART
- Magnification: 10x/20x
- Cell line: A172
  - Cultivation Condition: CTR
  - Number of Images: 4
  - Images Resolution: 1280px × 720px
- Cell line: A172
  - Cultivation Condition: TMZ
  - Number of Images: 1
- Microscope: IncuCyte
- Magnification: 10x
- Cell line: U251
  - Cultivation Condition: TMZ
  - Number of Images: 1
  - Images Resolution: 1408px × 1040px
- Microscope: Zeiss AxioCam
- Magnification: 20x
- Cell line: SCC25
  - Cultivation Condition: CTR
  - Number of Images: 2
  - Images Resolution: 600px × 512px
- Microscope: Zeiss Axiovert 200
- Magnification: 10x
- Cell line: MCF7
  - Cultivation Condition: CTR
  - Number of Images: 1
  - Images Resolution: 1388px × 1040px
- Cell line: MRC5
  - Cultivation Condition: CTR
  - Number of Images: 1