Brats MICCAI Brain tumor dataset

Submission Dates:
02/28/2020 to 02/26/2021
Citation Author(s):
Spyridon (Spyros)
Bakas
Perelman School of Medicine University of Pennsylvania
Submitted by:
khurram Ejaz
Last updated:
Fri, 02/28/2020 - 06:31
DOI:
10.21227/hdtd-5j88
Data Format:
nifti images
Links:
BRATS MICCAI BRAIN TUMOR DATASET
License:
Creative Commons Attribution
15297 Views
Categories:
Image Processing
Biomedical and Health Sciences
Medical Imaging
Keywords:
MRI
 
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Abstract 

BraTS has always been focusing on the evaluation of state-of-the-art methods for the segmentation of brain tumors in multimodal magnetic resonance imaging (MRI) scans. BraTS 2019 utilizes multi-institutional pre-operative MRI scans and focuses on the segmentation of intrinsically heterogeneous (in appearance, shape, and histology) brain tumors, namely gliomas. Furthemore, to pinpoint the clinical relevance of this segmentation task, BraTS’19 also focuses on the prediction of patient overall survival, via integrative analyses of radiomic features and machine learning algorithms. Finally, BraTS'19 intends to experimentally evaluate the uncertainty in tumor segmentations.

Instructions: 

Here,  Instructions are to develop code to read the files. Where path of dataset should be set. From that path one counter read the files in particular sequence one by one.  From the path there will form four sub files in which dataset volumes are arrange in to T1, T2, Flair and T1Ce sequences. Every volume have 155 slices. Slices are infact MRI image. 155 slices are for one volume. And 210 Volumes are High grades Glioma dataset. Wereas 75 Volumes are in another type of glioma. Hence total is 285. Therefore for this huge dataset, Matlab is best plateform for programming but system memory should be more than 16 GB. Processor should be 3.0 Ghz. Hard disk should more 500 GB. 

Comments

Submitted by khurram Ejaz on Fri, 02/28/2020 - 06:32

The above images are just subset, Image are more than 200,000 but they are in form of nifti file and im readingthem through my own writen script. these image are taken from sequence T1, Volume is 1 and Slices are from 65 to 75.

Submitted by shendy akny on Thu, 10/24/2024 - 08:25

The above images are just subset, Image are more than 200,000 but they are in form of nifti file and im readingthem through my own writen script. these image are taken from sequence T1, Volume is 1 and Slices are from 65 to 75

Submitted by khurram Ejaz on Fri, 02/28/2020 - 06:33

The above images are just subset, Image are more than 200,000 but they are in form of nifti file and im readingthem through my own writen script. these image are taken from sequence T1, Volume is 1 and Slices are from 65 to 75.

Submitted by Rajsekhar Golan... on Fri, 05/31/2024 - 05:47

I'm a data science student can you please priovide me dataset for my research project. Thanks in advance.

Submitted by Ayad Korial on Tue, 11/24/2020 - 07:22

Please, I need this data for my research

Submitted by al mou on Thu, 11/26/2020 - 17:21

Sorry you know how to access this dataset!

Submitted by al mou on Thu, 11/26/2020 - 17:40

I need this dataset for research.

Submitted by YiChung Chen on Tue, 01/26/2021 - 12:04

I need tumor dataset for research

Submitted by sheetal wadhai on Wed, 02/03/2021 - 06:03

Please, I need this data for my research

Submitted by Mohit Kumar on Tue, 03/02/2021 - 04:13

Please, I need this data for my research.

Submitted by BURAK TASCI on Mon, 03/22/2021 - 07:52

Please, I need this data for my research

Submitted by Snehith Kongara on Mon, 03/29/2021 - 09:20

Could you provide the data, I need tumor dataset for my Project.

Submitted by Ramanjaneyulu K... on Mon, 03/29/2021 - 09:48

Can you provide the tumor dataset, required for my research.

Submitted by SANDHEEP NK on Wed, 04/07/2021 - 11:26

Can you provide me with tumor dataset i need it for my project

Submitted by byounghak kim on Sun, 04/11/2021 - 21:39

Please, I need this data for my research.

Submitted by BURAK TASCI on Thu, 05/13/2021 - 17:22

Can you provide the tumor dataset, required for my research.

Submitted by Nir Yakobovits on Sun, 05/23/2021 - 09:48

Can you provide the tumor dataset, required for my research.

Submitted by Suhas Alavala on Sat, 08/14/2021 - 13:49

Can you please provide me the Data, required for my Project.

Submitted by Hee Kim on Tue, 08/24/2021 - 13:42

Dear whom it may concern,
would you please provide me the data? I would like to use it for research purposes. Many thanks in advance.
Best regards,
Hee Kim

Submitted by Sachin Balakumar on Fri, 09/03/2021 - 13:09

Can anybody help in getting this dataset for my project work?

Submitted by RAJASEKAR O on Wed, 09/22/2021 - 01:57

Submitted by rajasekar on Wednesday, 22/09/2021 - 11:26
how to get this dataset for my project work?

Submitted by POTULA SRI RUPIN on Fri, 01/28/2022 - 11:54

I need this dataset for my project.

Submitted by Pawan Mishra on Mon, 02/07/2022 - 12:17

Please provide this dataset for a research project.

Submitted by Hana Niamoradi on Sat, 04/23/2022 - 04:13

Please provide me this dataset. I need it for my research

Submitted by Mehmet Hasanzade on Fri, 06/03/2022 - 09:19

Hello,
Could you please provide this dataset?
Regards

Submitted by James Kabucho on Sat, 06/04/2022 - 20:21

Kindly may I have access to the dataset for research purposes?

Submitted by Amir Saleh on Mon, 06/06/2022 - 12:19

Please, I need this data for my research

Submitted by Padmini Ramesh on Mon, 11/14/2022 - 06:09

Please may I know the best way to download the dataset

Submitted by Lakshan Madhushanka on Thu, 01/19/2023 - 23:39

Please may I know the best way to download the dataset for research purposes

Submitted by Hugh Mathys on Sun, 02/19/2023 - 00:50

Please may I know the best way to download the dataset

Submitted by Hashir Ali on Thu, 03/16/2023 - 00:35

I am a student and I need this data set for my research and my project. could you kindly share this data set with me my email is 70109433@student.uol.edu.pk
I will be very grateful to you

Submitted by Abdullah Shahid on Sun, 01/14/2024 - 00:19

I am a student studing medical deep learning and I need this data set for my project.
could you kindly share this data set
I will be very grateful to you :)

Submitted by Dmitry Fadeev on Tue, 07/02/2024 - 04:36

I am researcher at TUM and would like to access the dataset for a project.

Submitted by Mays Neiroukh on Mon, 10/14/2024 - 11:47

I am a student studing medical imaging senior project and I need this data set for my project.
Could you please share it with me?

 

Competition Dataset Files

AttachmentSize
File Volume number 1, Slice 65 to 75, Sequence T187.03 KB
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