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Standard Dataset

Multi-profile and Multi-omic data for LUAD

Citation Author(s):
Diego Salazar (Universidad de los Andes)
Submitted by:
Diego Salazar
Last updated:
DOI:
10.21227/wdh5-4435
Data Format:
No Ratings Yet

Abstract

Columns are genes, miRNAs, drugs, or cnv. Rows are patient identifiers or cell lines.

Instructions:

The datasets contain the omics profiles of [cnv, drug, mirna, mrna] with the following dimensions:

 ..................................

cnv dimensions for ccle: 604 x 1280

cnv dimensions for tcga: 444 x 1280

--''--

drug dimensions for ccle: 604 x 262

drug dimensions for tcga: 444 x 262

--''--

mirna dimensions for ccle: 604 x 336

mirna dimensions for tcga: 444 x 336

--''--

mrna dimensions for ccle: 604 x 2117

mrna dimensions for tcga: 444 x 2117

 

Additionally, the R and Theta constraints are loaded. The dimensions depend on the specified features. For example, drug_drug_theta.csv contains a matrix of dimensions 262 x 262.