Datasets
Standard Dataset
motifMDA
- Citation Author(s):
- Submitted by:
- Bowei Zhao
- Last updated:
- Wed, 11/22/2023 - 00:27
- DOI:
- 10.21227/219z-4y29
- License:
Abstract
To conduct a comprehensive evaluation of MotifMDA's effectiveness, HMDD V2.0 \cite{li2014hmdd} is employed as the benchmark dataset. It encompasses 495 miRNAs, 383 diseases, and 5,430 human MDAs that have been confirmed through experimental validation. Moreover, another well-regarded database, namely miR2Disease, is also employed as a benchmark dataset in our study. miR2Disease \cite{jiang2009mir2disease} is a comprehensive repository that captures associations between dysfunctional miRNAs and an array of human diseases, and it encompasses 353 miRNAs, 151 diseases, and a total of 2,299 established associations between them. To conduct a comprehensive evaluation of MotifMDA's effectiveness, HMDD V2.0 \cite{li2014hmdd} is employed as the benchmark dataset. It encompasses 495 miRNAs, 383 diseases, and 5,430 human MDAs that have been confirmed through experimental validation. Moreover, another well-regarded database, namely miR2Disease, is also employed as a benchmark dataset in our study. miR2Disease \cite{jiang2009mir2disease} is a comprehensive repository that captures associations between dysfunctional miRNAs and an array of human diseases, and it encompasses 353 miRNAs, 151 diseases, and a total of 2,299 established associations between them.
# MotifMDA
This is a public code for predicting miRNA-disease associations
Dataset Files
- disease number ID.txt (9.05 kB)
- miRNA number ID.txt (8.28 kB)
- main.txt (6.67 kB)
Documentation
Attachment | Size |
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readme.txt | 77 bytes |