Datasets
Standard Dataset
Datasets of Med-RISE
- Citation Author(s):
- Submitted by:
- Yingfeng Zheng
- Last updated:
- Sun, 12/01/2024 - 08:30
- DOI:
- 10.21227/g9z1-tp49
- License:
20 Views- Categories:
- Keywords:
Abstract
Datasetsof Med-RISE:
The study incorporates three datasets, each serving a unique purpose in medical research and analysis:
Code for the Med-RISE framework (Appendix 1), which details the architecture of Med-RISE.
Med-RISE Local Dataset (Appendix 2): A sample subset from the Med-RISE database, which was specifically created for this study. It integrates biomedical articles, clinical resources, medical textbooks, and general medical knowledge, offering a diverse and comprehensive resource for exploring various medical disciplines.
EYE500 Dataset (Appendix 3): A dataset explicitly developed for this study in collaboration with ophthalmologists from Zhongshan Ophthalmic Center, Sun Yat-sen University. It focuses on ophthalmology-related data to support specialized research in eye health and medical decision-making.
PubMedQA (Revised Version) (Appendix 4): A refined version of the PubMedQA medical reading comprehension dataset. This dataset comprises questions derived from biomedical abstracts requiring “yes,” “no,” or “maybe” answers. The revision was necessary due to the potential inaccuracies in answers caused by the variability in the quality and interpretation of the original studies. To ensure reliability, two medical experts independently re-verified the answers, with a senior physician resolving disagreements. This revision enhances the dataset's accuracy and trustworthiness for answering biomedical research questions.
This dataset is provided exclusively for research purposes.
Only sample datasets are uploaded. The full datasets and accompanying code are not publicly available due to privacy and ethical considerations. Researchers interested in accessing the complete versions can request them from the first author at wangdq5@mail2.sysu.edu.cn, providing a reasonable justification for their research use.
Dataset Files
- Appendix 2 Sample of Med-RISE local dataset (n=500).xlsx (1.98 MB)
- Appendix 3 Sample of EYE500 dataset (n=50).xlsx (16.59 kB)
- Appendix 4 PubMedQA_revised version (n=200) v3.xlsx (128.05 kB)
- Appendix 1 Code for the Med-RISE framework.zip (17.89 kB)
Comments
Only sample datasets are uploaded. The full datasets and accompanying code are not publicly available due to privacy and ethical considerations. Researchers interested in accessing the complete versions can request them from the first author at wangdq5@mail2.sysu.edu.cn, providing a reasonable justification for their research use.