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An example of the implementation of the SCQP method using the lin operator is included in the MAIN_example.py file. This file details an optimal control problem involving an inverted pendulum, solved with the sequential convex quadratic programming (SCQP) method, and is based on the example presented in the publication: R. Verschueren, N. van Duijkeren, R. Quirynen, M. Diehl, Moritz, "Exploiting Convexity in Direct Optimal Control: A Sequential Convex Quadratic Programming Method," Proceedings of the 2016 Conference on Decision and Control, 2016, pp. 1099 - 1104.

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We collected BV , RON;SP from over 150 publications reported since the year 2000 and classified them according to their - main- topology and process type.

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Component based software development (CBSD) is a trend in the indusrty. This dataset contains the size of the components in various softwares viz. WEKA, Apache crypto library, Apache Codec library and basic linear alebra library by M. Elsheimy. The first three are in Java and last one is in C# programming languages, From the WEKA repository, 11 packages have been considered,

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The 5K EPP Dataset includes 5007 photos of water crystaks classified in 13 categories. This dataset was created under the leaderhip of Prof. Masaru Emoto.

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We have long known that the characterization of protein three-dimensional structure is key to obtaining a detailed understanding of protein function. Computational approaches to protein structure characterization have largely addressed a narrow formulation of the problem, where the goal is the determination of one structure, also known as the native structure, from a given protein amino-acid sequence. However, many researchers over the years have argued for broadening our view of proteins to account for the multiplicity of native structures.

Instructions: 

The .zip file contains 3 folders when unzipped. We provide the details of each folder below.

 

“monomorphic_benchmark_targets” folder: Contains 20 protein targets organized into 20 subfolders. Data for each protein is provided in a subfolder named with its pdb id. Each such subfolder contains the following 4 files.

  1. A .fasta file containing the amino-acid sequence of the protein.

  2. A .pdb file containing the native tertiary conformation coordinates. Detailed format for a .pdb file can be found in http://www.wwpdb.org/documentation/file-format

  3. A .frag3 file containing the fragments of length 3 for the protein sequence generated from http://old.robetta.org/

  4. A .frag9 file containing the fragments of length 9 for the protein sequence generated from http://old.robetta.org/

 

“monomorphic_casp_targets” folder: Contains 10 protein targets organized into 10 subfolders. Data for each protein is provided in a subfolder named with its casp id. Each such subfolder contains the following 4 files.

  1. A .fasta file containing the amino-acid sequence of the protein.

  2. A .pdb file containing the native tertiary conformation coordinates.

  3. A .frag3 file containing the fragments of length 3 for the protein sequence generated from http://old.robetta.org/

  4. A .frag9 file containing the fragments of length 9 for the protein sequence generated from http://old.robetta.org/

 

“metamorphic_benchmark_targets” folder: Contains 18 pairs of protein targets organized into 18 subfolders. Data for each target pair is provided in a subfolder named with its pair id (as indicated in the paper). Each such subfolder contains the following 5 files.

  1. A .fasta file containing the amino-acid sequence common to the pair of target proteins.

  2. A .pdb file containing the native tertiary conformation coordinates for the first target in the target pair.

  3. A .pdb file containing the native tertiary conformation coordinates for the second target in the target pair.

  4. A .frag3 file containing the fragments of length 3 for the protein sequence generated from http://old.robetta.org/

  5. A .frag9 file containing the fragments of length 9 for the protein sequence generated from http://old.robetta.org/

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Our datasets_PAGML isbased on two public benchmark datasets SHREC2013 and SHREC2014. Sketches are the same as the original datasets. Each 3D shape in the the original datasets is represented as 12 views.

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The FLoRI21 dataset provides ultra-widefield fluorescein angiography images for the development and evaluation of retinal image registration algorithms. 

Instructions: 

Currently, a sample pair of low resolution images is provided and the associated paper is submitted for review. The entire dataset will be released with the publication of the paper.

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